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Update Machine specific stuff authored by Alain O' Miniussi's avatar Alain O' Miniussi
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User's-Guide/Installation/Machine-specific-stuff.md
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...@@ -90,74 +90,47 @@ refer to those script help (`-h`) option for more details. ...@@ -90,74 +90,47 @@ refer to those script help (`-h`) option for more details.
## Build ## Build
As usual As usual
# Ada (Idris) # Jean Zay (Idris)
## Environment ## Environment
The following environment has been tested On October 2019, the code can build with the following environment:
``` ```
[roth005@ada338: bld2]$ more ~/.modules module load intel-all/19.0.5
module purge module load intel-compilers/19.0.5
module load intel/2018.2 module load intel-tbb/19.0.5
module load boost/1.67.0 module load intel-vtune/19.0.5
module load hdf5/seq/1.8.14 module load intel-itac/19.0.5
# for some reasons, hdf5 want to link static, we need shared (run path is embedded, so LD_LIBRARY_PATH does not need updating) module load intel-mkl/19.0.5
export WRAPPER_LDFLAGS="$(h5c++ -show -shlib | sed -e 's/.*-D\w\+//')" module load intel-advisor/19.0.5
module load python/3.6.1 module load boost/1.70.0/intel-19.0.4-mpi
module load gcc/4.9.4 # only loaded for cmake, which could have been linked static module load intel-mpi/19.0.5
module load cmake/3.7.2 module load hdf5/1.8.21/intel-19.0.4
[roth005@ada338: bld2]$ source ~/.modules module load cmake/3.14.4/gcc-4.8.5 git-lfs git
(remove) cmake version 3.7.2 module load python
(remove) gcc version 4.9.4
(remove) python version 3.6.1 export CC=icc
(remove) hdf5 seq 1.8.14 export CXX=icpc
(remove) boost version 1.67.0 ippldpath=$(which icc | sed -e 's/bin\/intel64\/icc$/ipp\/lib\/intel64_lin\/threaded/')
(remove) Intel(R) Parallel Studio XE 2018 Update 2 Cluster Edition for Linux* if ! echo $LD_LIBRARY_PATH | grep -q "$ippldpath"
(load) Intel(R) Parallel Studio XE 2018 Update 2 Cluster Edition for Linux* then
...blah blah blah.... export export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$ippldpath
(load) boost version 1.67.0 fi
(load) hdf5 seq 1.8.14
(load) python version 3.6.1
(load) gcc version 4.9.4
(load) cmake version 3.7.2
[roth005@ada338: bld2]$
``` ```
## Configuration Note that we need to explicitly update the **LD_LIBRARY_PATH** so that the binaries can find the `ipp` support (needed in release mode).
MPI detect does not work that well, so wee need to provide the MPI wrapper as compilers: Support is working on that.
```
[roth005@ada338: bld2]$ cmake -DCMAKE_BUILD_TYPE=Release -DCMAKE_C_COMPILER=mpiicc -DCMAKE_CXX_COMPILER=mpiicpc ../
-- The CXX compiler identification is Intel 18.0.2.20180210
-- Check for working CXX compiler: /smplocal/pub/Modules/IDRIS/wrappers/mpiicpc
-- Check for working CXX compiler: /smplocal/pub/Modules/IDRIS/wrappers/mpiicpc -- works
...blah blah blah....
-- Boost version: 1.67.0
-- Found the following Boost libraries:
-- mpi
-- program_options
-- chrono
-- filesystem
-- system
-- Configuring done
-- Generating done
-- Build files have been written to: /workgpfs/rech/oth/roth005/fargOCA/bld2
[roth005@ada338: bld2]$
```
### Build
As usual ## Build
## Test: Nothing special:
We test the unit tests and integration tests (with 4 MPI process) with:
``` ```
<builddir>$./tools/dev/adaTest.sh $ cmake <srcpath>
....
$ make
``` ```
You can interupt the tracking phase and relaunch it wth:
```
<builddir>$./tools/dev/adaTrackTest.sh
```
# Aurora (Lund) # Aurora (Lund)
## Environment ## Environment
......